Transcript: ENST00000494921.2 DTD1-202

Description

D-aminoacyl-tRNA deacylase 1 [Source:HGNC Symbol;Acc:HGNC:16219]

Gene Synonyms

BA379J5.3, BA555E18.1, C20ORF88, DUEB, HARS2, MGC119131, MGC41905, PQN-68

Location

Chromosome 20: 18,587,964-18,632,684 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 18785 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSG00000125821.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000377452.4	DTD1-201	3953	209aa	ENSP00000366672.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13138	Q8TEA8	NM_080820.6	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000494921.2	DTD1-202	2890	213aa	ENSP00000495845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS86938	A0A2R8Y6X2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000647441.1	DTD1-203	4112	127aa	ENSP00000493969.1	Nonsense mediated decay		A0A2R8YCT7	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,890 bps, Translation length: 213 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS86938

Transcript Support Level (TSL)

TSL:2

Version

ENST00000494921.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000494921.2 DTD1-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000494921.2 DTD1-202

Summary

About Us

Get help

Our sister sites

Follow us