Human (GRCh38.p14)
Description

lysine demethylase 3A [Source:HGNC Symbol;Acc:HGNC:20815]

Gene Synonyms

JHMD2A, JMJD1, JMJD1A, KIAA0742, TSGA

Location
About this transcript

This transcript has 26 exons, is annotated with 15 domains and features, is associated with 23779 variant alleles and maps to 743 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000312912.10KDM3A-20146671321aaENSP00000323659.5
 
Protein coding
CCDS1990Q9Y4C1 NM_018433.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000409556.5KDM3A-20349281321aaENSP00000386660.1
 
Protein coding
CCDS1990Q9Y4C1 -GENCODE basicAPPRIS P1TSL:5
ENST00000409064.5KDM3A-20246211321aaENSP00000386516.1
 
Protein coding
CCDS1990Q9Y4C1 -GENCODE basicAPPRIS P1TSL:1
ENST00000452034.5KDM3A-206709121aaENSP00000396561.1
 
Protein coding
C9JC73 -TSL:5CDS 3' incomplete
ENST00000427678.1KDM3A-204565170aaENSP00000397660.1
 
Protein coding
C9J7Q7 -TSL:2CDS 3' incomplete
ENST00000441719.5KDM3A-2058741711aaENSP00000394691.1
 
Nonsense mediated decay
F8WE62 -TSL:2
ENST00000485171.1KDM3A-212556No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000466058.1KDM3A-209448No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000462197.1KDM3A-207448No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000498528.1KDM3A-215352No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000491383.5KDM3A-2144485No protein-
 
Retained intron
--TSL:1
ENST00000470160.1KDM3A-2102955No protein-
 
Retained intron
--TSL:2
ENST00000488971.1KDM3A-213975No protein-
 
Retained intron
--TSL:3
ENST00000463013.1KDM3A-208577No protein-
 
Retained intron
--TSL:3
ENST00000483866.1KDM3A-211449No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 26, Coding exons: 25, Transcript length: 4,621 bps, Translation length: 1,321 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y4C1

CCDS

This transcript is a member of the Human CCDS set: CCDS1990

Transcript Support Level (TSL)

TSL:1

Version

ENST00000409064.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.