Human (GRCh38.p14)
Description

autophagy related 4B cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:20790]

Gene Synonyms

APG4B, AUTL1, DKFZP586D1822, KIAA0943

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 19815 variant alleles and maps to 820 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000404914.8ATG4B-2052797393aaENSP00000384259.3
 
Protein coding
CCDS46564Q9Y4P1-1 NM_013325.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000405546.7ATG4B-2063294380aaENSP00000383964.3
 
Protein coding
CCDS46565Q9Y4P1-6 -GENCODE basicTSL:2
ENST00000402096.5ATG4B-2041685331aaENSP00000384661.1
 
Protein coding
Q9Y4P1-4 -GENCODE basicTSL:2
ENST00000400771.7ATG4B-202663219aaENSP00000383582.3
 
Protein coding
C9JIK8 -TSL:5CDS 3' incomplete
ENST00000419606.5ATG4B-20855366aaENSP00000400050.1
 
Protein coding
C9J1C1 -TSL:4CDS 3' incomplete
ENST00000625810.2ATG4B-22637088aaENSP00000487133.1
 
Protein coding
F2Z2K8 -GENCODE basicTSL:4
ENST00000344376.9ATG4B-201156676aaENSP00000344960.5
 
Nonsense mediated decay
H0Y2Y0 -TSL:5CDS 5' incomplete
ENST00000400772.6ATG4B-20362588aaENSP00000383583.2
 
Nonsense mediated decay
F2Z2K8 -TSL:4
ENST00000415107.5ATG4B-20735688aaENSP00000390597.1
 
Nonsense mediated decay
F2Z2K8 -TSL:5
ENST00000430617.6ATG4B-212623No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000491867.5ATG4B-222435No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000482507.5ATG4B-2202414No protein-
 
Retained intron
--TSL:1
ENST00000494465.5ATG4B-2252365No protein-
 
Retained intron
--TSL:5
ENST00000475693.1ATG4B-2172237No protein-
 
Retained intron
--TSL:2
ENST00000483778.5ATG4B-2211103No protein-
 
Retained intron
--TSL:3
ENST00000493618.5ATG4B-223899No protein-
 
Retained intron
--TSL:5
ENST00000460211.5ATG4B-213871No protein-
 
Retained intron
--TSL:2
ENST00000494132.1ATG4B-224828No protein-
 
Retained intron
--TSL:2
ENST00000425239.5ATG4B-209807No protein-
 
Retained intron
--TSL:2
ENST00000475195.5ATG4B-216762No protein-
 
Retained intron
--TSL:2
ENST00000468018.5ATG4B-215721No protein-
 
Retained intron
--TSL:5
ENST00000465399.5ATG4B-214581No protein-
 
Retained intron
--TSL:2
ENST00000428861.1ATG4B-210580No protein-
 
Retained intron
--TSL:2
ENST00000479554.5ATG4B-218556No protein-
 
Retained intron
--TSL:4
ENST00000429899.1ATG4B-211524No protein-
 
Retained intron
--TSL:4
ENST00000479941.1ATG4B-219374No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,797 bps, Translation length: 393 residues

MANE

This MANE Select transcript contains ENSP00000384259 and matches to NM_013325.5 and NP_037457.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y4P1

CCDS

This transcript is a member of the Human CCDS set: CCDS46564

Transcript Support Level (TSL)

TSL:1

Version

ENST00000404914.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.