Human (GRCh38.p14)
Description

focadhesin [Source:HGNC Symbol;Acc:HGNC:23377]

Gene Synonyms

FLJ20375, KIAA1797

Location
About this transcript

This transcript has 46 exons, is annotated with 19 domains and features, is associated with 170725 variant alleles and maps to 1115 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000338382.11FOCAD-20157941801aaENSP00000344307.6
 
Protein coding
CCDS34993Q5VW36 NM_001375567.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000380249.5FOCAD-20260961801aaENSP00000369599.1
 
Protein coding
CCDS34993Q5VW36 -GENCODE basicAPPRIS P1TSL:1
ENST00000603044.5FOCAD-203635128aaENSP00000475075.1
 
Protein coding
S4R450 -TSL:4CDS 3' incomplete
ENST00000604254.5FOCAD-212572180aaENSP00000474563.1
 
Protein coding
S4R3N8 -TSL:5CDS 3' incomplete
ENST00000603695.1FOCAD-20955999aaENSP00000474683.1
 
Protein coding
S4R3S9 -TSL:4CDS 3' incomplete
ENST00000603648.2FOCAD-20859269aaENSP00000475030.2
 
Nonsense mediated decay
S4R437 -TSL:4CDS 5' incomplete
ENST00000604828.1FOCAD-2131973No protein-
 
Protein coding CDS not defined
--TSL:NA
ENST00000603844.1FOCAD-210693No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000603631.1FOCAD-207672No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000604103.1FOCAD-211591No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000605031.5FOCAD-214556No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000605852.1FOCAD-216554No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000603552.1FOCAD-205534No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000603610.1FOCAD-206214No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000605086.5FOCAD-2154195No protein-
 
Retained intron
--TSL:1
ENST00000603492.1FOCAD-204569No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 46, Coding exons: 43, Transcript length: 6,096 bps, Translation length: 1,801 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VW36

CCDS

This transcript is a member of the Human CCDS set: CCDS34993

Transcript Support Level (TSL)

TSL:1

Version

ENST00000380249.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.