Human (GRCh38.p14)
Description

DNA cross-link repair 1C [Source:HGNC Symbol;Acc:HGNC:17642]

Gene Synonyms

A-SCID, ARTEMIS, FLJ11360, SCIDA, SNM1C

Location
About this transcript

This transcript has 16 exons, is associated with 23928 variant alleles and maps to 610 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000378278.7DCLRE1C-2095960692aaENSP00000367527.2
 
Protein coding
CCDS31149Q96SD1-1 NM_001033855.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000378289.8DCLRE1C-2103532434aaENSP00000367538.4
 
Protein coding
Q96SD1-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000697070.1DCLRE1C-2173167725aaENSP00000513085.1
 
Protein coding
A0A8V8TLW6 -GENCODE basicAPPRIS ALT2
ENST00000697047.1DCLRE1C-2162910614aaENSP00000513066.1
 
Protein coding
CCDS91218A0A8V8TKN9 -GENCODE basicAPPRIS ALT2
ENST00000697075.1DCLRE1C-2222370692aaENSP00000513090.1
 
Protein coding
CCDS31149Q96SD1-1 -GENCODE basicAPPRIS P2
ENST00000697084.1DCLRE1C-2312343711aaENSP00000513098.1
 
Protein coding
A0A8V8TM57 -GENCODE basic
ENST00000378241.6DCLRE1C-202665154aaENSP00000367487.3
 
Nonsense mediated decay
X6R9W9 -TSL:5
ENST00000456122.2DCLRE1C-213388354aaENSP00000413180.3
 
Nonsense mediated decay
X6RJV5 -TSL:5
ENST00000697088.1DCLRE1C-2353078108aaENSP00000513101.1
 
Nonsense mediated decay
A0A8V8TKP5 --
ENST00000697074.1DCLRE1C-221298937aaENSP00000513089.2
 
Nonsense mediated decay
A0A8V8TKP0 --
ENST00000697071.1DCLRE1C-218298554aaENSP00000513086.1
 
Nonsense mediated decay
A0A8V8TKM6 --
ENST00000697072.1DCLRE1C-2192850310aaENSP00000513087.1
 
Nonsense mediated decay
A0A8V8TLX1 --
ENST00000378255.5DCLRE1C-207280756aaENSP00000367503.2
 
Nonsense mediated decay
Q96SD1-2 -TSL:1
ENST00000697073.1DCLRE1C-220279337aaENSP00000513088.2
 
Nonsense mediated decay
A0A8V8TKM3 --
ENST00000396817.6DCLRE1C-211276154aaENSP00000380030.3
 
Nonsense mediated decay
Q96SD1-2 -TSL:1
ENST00000378246.6DCLRE1C-2042637108aaENSP00000367492.3
 
Nonsense mediated decay
Q96SD1-3 -TSL:1
ENST00000378254.5DCLRE1C-206248556aaENSP00000367502.2
 
Nonsense mediated decay
Q96SD1-2 -TSL:1
ENST00000489161.2DCLRE1C-214247137aaENSP00000513000.2
 
Nonsense mediated decay
A0A8V8TKJ5 -TSL:5
ENST00000697082.1DCLRE1C-229246554aaENSP00000513096.1
 
Nonsense mediated decay
A0A8V8TKM6 --
ENST00000378258.5DCLRE1C-208246354aaENSP00000367506.2
 
Nonsense mediated decay
Q96SD1-2 -TSL:1
ENST00000697078.1DCLRE1C-2252440119aaENSP00000513093.1
 
Nonsense mediated decay
A0A8V8TL07 --
ENST00000697085.1DCLRE1C-2322431119aaENSP00000513099.1
 
Nonsense mediated decay
A0A8V8TL07 --
ENST00000697081.1DCLRE1C-2282430108aaENSP00000513095.1
 
Nonsense mediated decay
A0A8V8TKP5 --
ENST00000697077.1DCLRE1C-2242410119aaENSP00000513092.1
 
Nonsense mediated decay
A0A8V8TL07 --
ENST00000697080.1DCLRE1C-227239254aaENSP00000513094.1
 
Nonsense mediated decay
A0A8V8TKM6 --
ENST00000492201.6DCLRE1C-2152380356aaENSP00000512999.1
 
Nonsense mediated decay
A0A8V8TKH3 -TSL:3
ENST00000697076.1DCLRE1C-2232308310aaENSP00000513091.1
 
Nonsense mediated decay
A0A8V8TLX1 --
ENST00000697083.1DCLRE1C-230225654aaENSP00000513097.1
 
Nonsense mediated decay
A0A8V8TKM6 --
ENST00000378249.5DCLRE1C-205224637aaENSP00000367496.2
 
Nonsense mediated decay
Q96SD1-3 -TSL:1
ENST00000357717.6DCLRE1C-201222866aaENSP00000350349.3
 
Nonsense mediated decay
Q96SD1-3 -TSL:1
ENST00000697089.1DCLRE1C-236168054aaENSP00000513102.1
 
Nonsense mediated decay
A0A8V8TKM6 --
ENST00000697087.1DCLRE1C-234148854aaENSP00000513100.1
 
Nonsense mediated decay
A0A8V8TKM6 --
ENST00000697079.1DCLRE1C-2261980No protein-
 
Protein coding CDS not defined
---
ENST00000418843.5DCLRE1C-212901No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000697086.1DCLRE1C-2334203No protein-
 
Retained intron
---
ENST00000378242.1DCLRE1C-2031933No protein-
 
Retained intron
--TSL:2
ENST00000697091.1DCLRE1C-2381410No protein-
 
Retained intron
---
ENST00000697090.1DCLRE1C-2371046No protein-
 
Retained intron
---
Statistics

Exons: 16, Coding exons: 3, Transcript length: 2,807 bps, Translation length: 56 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96SD1

Transcript Support Level (TSL)

TSL:1

Version

ENST00000378255.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.