Human (GRCh38.p14)
Description

heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:5273]

Gene Synonyms

PERLECAN, PRCAN, SJS1

Location
About this transcript

This transcript has 97 exons, is annotated with 311 domains and features, is associated with 55730 variant alleles and maps to 2560 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000374695.8HSPG2-203143414391aaENSP00000363827.3
 
Protein coding
CCDS30625P98160 NM_005529.7MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000635682.1HSPG2-214921307aaENSP00000489161.1
 
Protein coding
A0A0U1RQT3 -TSL:5CDS 5' and 3' incomplete
ENST00000374673.4HSPG2-201865288aaENSP00000497688.1
 
Protein coding
A0A3B3IT11 -TSL:3CDS 5' and 3' incomplete
ENST00000644714.1HSPG2-215708236aaENSP00000496473.1
 
Protein coding
A0A2R8YH07 -CDS 5' and 3' incomplete
ENST00000374676.4HSPG2-202411109aaENSP00000363808.5
 
Protein coding
H7BYA5 -TSL:3CDS 5' incomplete
ENST00000427897.1HSPG2-205589197aaENSP00000397573.1
 
Non stop decay
H0Y5A9 -TSL:5CDS 5' incomplete
ENST00000412328.5HSPG2-204828No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000486901.1HSPG2-2113586No protein-
 
Retained intron
--TSL:2
ENST00000471322.2HSPG2-2081602No protein-
 
Retained intron
--TSL:5
ENST00000481644.1HSPG2-210839No protein-
 
Retained intron
--TSL:2
ENST00000439717.2HSPG2-206637No protein-
 
Retained intron
--TSL:2
ENST00000453796.1HSPG2-207621No protein-
 
Retained intron
--TSL:2
ENST00000493940.2HSPG2-212584No protein-
 
Retained intron
--TSL:5
ENST00000480900.1HSPG2-209500No protein-
 
Retained intron
--TSL:5
ENST00000498495.1HSPG2-213488No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 97, Coding exons: 97, Transcript length: 14,341 bps, Translation length: 4,391 residues

MANE

This MANE Select transcript contains ENSP00000363827 and matches to NM_005529.7 and NP_005520.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: P98160

CCDS

This transcript is a member of the Human CCDS set: CCDS30625

Transcript Support Level (TSL)

TSL:1

Version

ENST00000374695.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.