Human (GRCh38.p14)
Description

SAMM50 sorting and assembly machinery component [Source:HGNC Symbol;Acc:HGNC:24276]

Gene Synonyms

CGI-51, OMP85, SAM50, TOB55, TRG-3, YNL026W

Location
About this transcript

This transcript has 15 exons, is annotated with 10 domains and features, is associated with 18700 variant alleles and maps to 615 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000350028.5SAMM50-2011692469aaENSP00000345445.4
 
Protein coding
CCDS14055Q9Y512 NM_015380.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000493161.1SAMM50-204829No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000493621.1SAMM50-205283No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000465768.1SAMM50-202169No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000494795.1SAMM50-2063248No protein-
 
Retained intron
--TSL:2
ENST00000474323.5SAMM50-2032368No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,692 bps, Translation length: 469 residues

MANE

This MANE Select transcript contains ENSP00000345445 and matches to NM_015380.5 and NP_056195.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y512

CCDS

This transcript is a member of the Human CCDS set: CCDS14055

Transcript Support Level (TSL)

TSL:1

Version

ENST00000350028.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.