Transcript: ENST00000246657.2 CCR7-201

Description

C-C motif chemokine receptor 7 [Source:HGNC Symbol;Acc:HGNC:1608]

Gene Synonyms

BLR2, CD197, CDW197, CMKBR7, EBI1

Location

Chromosome 17: 40,553,769-40,565,472 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 41 domains and features, is associated with 5085 variant alleles and maps to 271 oligo probes.

Gene

This transcript is a product of gene ENSG00000126353.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000246657.2	CCR7-201	2173	378aa	ENSP00000246657.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11369	A0N0Q0 P32248	NM_001838.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000579344.1	CCR7-203	1874	372aa	ENSP00000462631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS77026	J3KSS9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000578085.1	CCR7-202	787	199aa	ENSP00000463075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTN5	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,173 bps, Translation length: 378 residues

MANE

This MANE Select transcript contains ENSP00000246657 and matches to NM_001838.4 and NP_001829.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P32248

CCDS

This transcript is a member of the Human CCDS set: CCDS11369

Transcript Support Level (TSL)

TSL:1

Version

ENST00000246657.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000246657.2 CCR7-201

Summary

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Transcript: ENST00000246657.2 CCR7-201

Summary

About Us

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