Human (GRCh38.p14)
Description

spectrin repeat containing nuclear envelope protein 1 [Source:HGNC Symbol;Acc:HGNC:17089]

Gene Synonyms

8B, ARCA1, C6ORF98, CPG2, DJ45H2.2, ENAPTIN, KIAA0796, MYNE1, NESP1, NESPRIN-1, SCAR8, SYNE-1B

About this transcript

This transcript has 18 exons, is annotated with 22 domains and features, is associated with 71720 variant alleles and maps to 399 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000367255.10SYNE1-206277088797aaENSP00000356224.5
 
Protein coding
CCDS5236Q8NF91-1 NM_182961.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000423061.6SYNE1-211274758749aaENSP00000396024.1
 
Protein coding
A0A0C4DG40 -GENCODE basicTSL:1
ENST00000367248.7SYNE1-20371651433aaENSP00000356217.3
 
Protein coding
F5GXQ8 -GENCODE basicTSL:5
ENST00000672122.1SYNE1-24166601424aaENSP00000500559.1
 
Protein coding
A0A5F9ZHR3 -GENCODE basic
ENST00000367251.7SYNE1-20458371654aaENSP00000356220.3
 
Protein coding
H0Y325 -TSL:1CDS 5' incomplete
ENST00000367253.8SYNE1-20551891725aaENSP00000356222.4
 
Protein coding
Q8NF91-6 -GENCODE basicTSL:5
ENST00000367257.8SYNE1-20850221355aaENSP00000356226.4
 
Protein coding
H0Y326 -TSL:5CDS 5' incomplete
ENST00000413186.6SYNE1-21048601443aaENSP00000414510.2
 
Protein coding
Q8NF91-5 -GENCODE basicTSL:5
ENST00000673281.1SYNE1-24647701528aaENSP00000500893.1
 
Protein coding
A0A5F9ZI52 -CDS 3' incomplete
ENST00000354674.5SYNE1-2023785975aaENSP00000346701.4
 
Protein coding
CCDS87458F8WAI0 NM_001347702.2MANE Plus ClinicalGENCODE basicTSL:5
ENST00000671915.1SYNE1-2403779542aaENSP00000500319.1
 
Protein coding
A0A5F9ZHI3 -CDS 5' incomplete
ENST00000539504.5SYNE1-2363768952aaENSP00000441052.1
 
Protein coding
Q5JV20 -GENCODE basicTSL:5
ENST00000536990.5SYNE1-2333003911aaENSP00000516090.1
 
Protein coding
CCDS94022B7Z9Y6 -GENCODE basicTSL:2
ENST00000537750.5SYNE1-2352850615aaENSP00000441264.1
 
Protein coding
F5GYQ7 -TSL:5CDS 3' incomplete
ENST00000535896.7SYNE1-2322802752aaENSP00000500235.1
 
Protein coding
A0A5F9ZHD7 -GENCODE basicTSL:5
ENST00000672169.1SYNE1-2432789635aaENSP00000500287.1
 
Protein coding
A0A5F9ZHE1 -CDS 5' incomplete
ENST00000610489.2SYNE1-2392688494aaENSP00000481873.2
 
Protein coding
I6XKI8 -GENCODE basicTSL:5
ENST00000673173.1SYNE1-2452663591aaENSP00000500180.1
 
Protein coding
A0A5F9ZHB2 -CDS 5' incomplete
ENST00000466159.6SYNE1-2162610754aaENSP00000446021.1
 
Protein coding
F5H4Q0 -GENCODE basicTSL:1
ENST00000672154.1SYNE1-2422350510aaENSP00000500128.1
 
Protein coding
A0A5F9ZH86 -CDS 5' incomplete
ENST00000495090.6SYNE1-2291907612aaENSP00000438508.1
 
Protein coding
F5H422 -GENCODE basicTSL:1
ENST00000454018.7SYNE1-2131549511aaENSP00000390858.4
 
Protein coding
A0A0C4DH48 -TSL:1CDS 5' incomplete
ENST00000540663.5SYNE1-237776242aaENSP00000437411.1
 
Protein coding
F5H6R8 -TSL:4CDS 3' incomplete
ENST00000537033.1SYNE1-234647195aaENSP00000443879.1
 
Protein coding
F5GZ83 -TSL:4CDS 3' incomplete
ENST00000469439.1SYNE1-218630207aaENSP00000442805.1
 
Protein coding
H0YGD3 -TSL:3CDS 5' incomplete
ENST00000673163.1SYNE1-244552836aaENSP00000499934.1
 
Nonsense mediated decay
A0A5F9ZH00 --
ENST00000673451.1SYNE1-2472851542aaENSP00000500189.1
 
Nonsense mediated decay
A0A5F9ZH87 -CDS 5' incomplete
ENST00000474655.6SYNE1-221179862aaENSP00000440193.1
 
Nonsense mediated decay
H0YFT4 -TSL:1CDS 5' incomplete
ENST00000347037.9SYNE1-2013798No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000460912.6SYNE1-2143664No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000481502.5SYNE1-224585No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000476519.1SYNE1-222582No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000498751.1SYNE1-230578No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000367256.9SYNE1-20710742No protein-
 
Retained intron
--TSL:1
ENST00000409694.6SYNE1-20910634No protein-
 
Retained intron
--TSL:1
ENST00000461872.6SYNE1-21510075No protein-
 
Retained intron
--TSL:1
ENST00000478916.5SYNE1-2237780No protein-
 
Retained intron
--TSL:2
ENST00000471834.1SYNE1-2197229No protein-
 
Retained intron
--TSL:1
ENST00000490135.6SYNE1-2275707No protein-
 
Retained intron
--TSL:1
ENST00000489156.1SYNE1-2261891No protein-
 
Retained intron
--TSL:1
ENST00000684643.1SYNE1-2511629No protein-
 
Retained intron
---
ENST00000682252.1SYNE1-2491540No protein-
 
Retained intron
---
ENST00000684208.1SYNE1-2501540No protein-
 
Retained intron
---
ENST00000448038.3SYNE1-2121275No protein-
 
Retained intron
--TSL:5
ENST00000682179.1SYNE1-248868No protein-
 
Retained intron
---
ENST00000468937.2SYNE1-217688No protein-
 
Retained intron
--TSL:2
ENST00000490866.2SYNE1-228581No protein-
 
Retained intron
--TSL:2
ENST00000535081.1SYNE1-231561No protein-
 
Retained intron
--TSL:2
ENST00000545694.1SYNE1-238526No protein-
 
Retained intron
--TSL:3
ENST00000472563.2SYNE1-220525No protein-
 
Retained intron
--TSL:2
ENST00000488376.2SYNE1-225414No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,610 bps, Translation length: 754 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000466159.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.