Transcript: ENST00000703543.1

Description

PRH1-PRR4 readthrough

Location

Chromosome 12: 10,882,222-11,047,190 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 74388 variant alleles and maps to 351 oligo probes.

Gene

This transcript is a product of gene ENSG00000275778.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000703543.1	-	837	175aa	ENSP00000515364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A087WYT0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000535024.6	-	680	122aa	ENSP00000481571.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A087WY73	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536668.2	-	1618	265aa	ENSP00000482961.1	Nonsense mediated decay	A0A087WZY1	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 837 bps, Translation length: 175 residues

Version

ENST00000703543.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000703543.1

Summary

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Transcript: ENST00000703543.1

Summary

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