Transcript: ENST00000569074.1 CASC17-201

Description

cancer susceptibility 17 [Source:HGNC Symbol;Acc:HGNC:43911]

Gene Synonyms

LINC00600

Location

Chromosome 17: 71,097,775-71,202,177 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 47410 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSG00000260785.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000659670.1	CASC17-203	2096	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000569074.1	CASC17-201	2059	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000665992.1	CASC17-208	2022	No protein	-	lncRNA	-	-
ENST00000662323.1	CASC17-204	1418	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000659322.1	CASC17-202	1281	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000668920.1	CASC17-211	1162	No protein	-	lncRNA	-	-
ENST00000669182.1	CASC17-212	1151	No protein	-	lncRNA	-	-
ENST00000664372.1	CASC17-206	1079	No protein	-	lncRNA	-	-
ENST00000668160.1	CASC17-210	1025	No protein	-	lncRNA	-	-
ENST00000671130.1	CASC17-214	999	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000662349.1	CASC17-205	977	No protein	-	lncRNA	-	-
ENST00000669562.1	CASC17-213	940	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000667642.1	CASC17-209	937	No protein	-	lncRNA	-	-
ENST00000664398.1	CASC17-207	850	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,059 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000569074.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000569074.1 CASC17-201

Summary

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Transcript: ENST00000569074.1 CASC17-201

Summary

About Us

Get help

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