Transcript: ENST00000560259.2

Description

novel transcript

Location

Chromosome 15: 39,167,721-39,170,165 forward strand.

About this transcript

This transcript has 3 exons, is associated with 957 variant alleles and maps to 51 oligo probes.

Gene

This transcript is a product of gene ENSG00000259423.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000558255.1	-	696	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000560259.2	-	878	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000663018.1	-	514	No protein	-	lncRNA	-	-
ENST00000560129.2	-	401	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 878 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000560259.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

dotter confirmed [Definitions]

QC splicing correct

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000560259.2

Summary

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Transcript: ENST00000560259.2

Summary

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