Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LNCOC1 ENSG00000253741

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Description

lncRNA associated with ovarian cancer 1 [Source:HGNC Symbol;Acc:HGNC:53947]

Gene Synonyms

LNC-OC1

Location

Chromosome 8: 142,701,857-142,727,056 reverse strand.

GRCh38:CM000670.2

About this gene

This gene has 9 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000669349.1	LNCOC1-206	4194	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000520572.2	LNCOC1-201	5712	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000663158.1	LNCOC1-204	4254	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000665898.1	LNCOC1-205	3767	No protein	-	lncRNA		-	-
ENST00000662059.1	LNCOC1-203	2868	No protein	-	lncRNA		-	-
ENST00000654797.1	LNCOC1-202	2486	No protein	-	lncRNA		-	-
ENST00000689400.2	LNCOC1-208	1533	No protein	-	lncRNA		-	-
ENST00000701145.1	LNCOC1-209	1037	No protein	-	lncRNA		-	-
ENST00000687725.1	LNCOC1-207	872	No protein	-	lncRNA		-	-

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Summary

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