Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RTF1 ENSECAG00000020872

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Description

RTF1 homolog, Paf1/RNA polymerase II complex component [Source:VGNC Symbol;Acc:VGNC:22610]

Location

Primary_assembly 1: 148,715,030-148,758,097 reverse strand.

EquCab3.0:CM009148.1

About this gene

This gene has 4 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000139603.1	RTF1-204	4639	743aa	ENSECAP00000090125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000119132.1	RTF1-203	4456	742aa	ENSECAP00000064453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000061185.2	RTF1-201	4189	689aa	ENSECAP00000044835.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I9V0	-
ENSECAT00000022504.3	RTF1-202	4054	644aa	ENSECAP00000018601.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6USE1	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data