Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Vha13 FBgn0283536

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Description

Vacuolar H[+] ATPase 13kD subunit

Gene Synonyms

Vha13

Location

Primary_assembly 3R: 19,643,018-19,644,386 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants) and 113 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0346100	Vha13-RB	943	117aa	FBpp0311933	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHE7 Q9XZH6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0083804	Vha13-RA	703	117aa	FBpp0083214	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHE7 Q9XZH6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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