Darkener of apricot
Doa
Primary_assembly 3R: 28,888,073-28,922,772 forward strand.
BDGP6.46:AE014297.3
This gene has 15 transcripts (splice variants), 277 orthologues and 4 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0299751 | Doa-RP | 7311 | 2045aa | FBpp0289029 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86B73 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0308599 | Doa-RY | 5756 | 1535aa | FBpp0300823 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0C4DHG9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0299747 | Doa-RR | 4720 | 1229aa | FBpp0289025 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0EXQ0 Q86B72 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0299744 | Doa-RL | 4312 | 983aa | FBpp0289022 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q29R32 Q8IML9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0308598 | Doa-RX | 3967 | 889aa | FBpp0300822 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K6R9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0308600 | Doa-RZ | 3958 | 975aa | FBpp0300824 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K7Z3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0299743 | Doa-RK | 3693 | 832aa | FBpp0289021 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D5SHS5 P49762 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0479846 | Doa-RAB | 3168 | 599aa | FBpp0428182 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JRF7 A8WHH0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0299753 | Doa-RM | 3111 | 580aa | FBpp0289031 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0KI03 Q6IJ25 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0299742 | Doa-RJ | 3028 | 580aa | FBpp0289020 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V3J9 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0299749 | Doa-RT | 2971 | 580aa | FBpp0289027 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V3J9 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0299748 | Doa-RS | 2904 | 511aa | FBpp0289026 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z0R6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0299745 | Doa-RN | 2221 | 580aa | FBpp0289023 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V3J9 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0299750 | Doa-RU | 2164 | 580aa | FBpp0289028 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V3J9 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0299752 | Doa-RV | 2097 | 511aa | FBpp0289030 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z0R6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
