Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Genetic Variation
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- Structural variants
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Gene: CG42764 FBgn0261832

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Gene Synonyms

CG42764

Location

Primary_assembly 3L: 20,464,714-20,466,041 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0303392	CG42764-RA	767	232aa	FBpp0292454	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PTU4 C0PV53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0303393	CG42764-RB	872	229aa	FBpp0292455	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS32	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0331568	CG42764-RC	827	55aa	FBpp0303958	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFS4	-

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Summary

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