Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Patj FBgn0067864

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Description

Patj

Gene Synonyms

Patj

Location

Primary_assembly 3L: 1,798,803-1,802,184 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 6 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0072779	Patj-RC	3266	871aa	FBpp0072662	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V1B2 Q9NB04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0301625	Patj-RA	3264	871aa	FBpp0290839	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V1B2 Q9NB04	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0072781	Patj-RB	3236	871aa	FBpp0072664	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V1B2 Q9NB04	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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