Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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Genetic Variation
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- Structural variants
Gene expression
Pathway
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Gene: CG12945 FBgn0037755

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Gene Synonyms

CG12945

Location

Primary_assembly 3R: 9,787,816-9,791,221 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0347361	CG12945-RD	3095	449aa	FBpp0312541	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VH65	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0113214	CG12945-RB	2059	449aa	FBpp0112126	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGK2 Q9VH65	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0334685	CG12945-RC	2032	440aa	FBpp0306743	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFJ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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