Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
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Genetic Variation
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- Structural variants
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Pathway
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External references
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ID History
- Gene history

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Gene: RpS11 FBgn0033699

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Description

Ribosomal protein S11

Gene Synonyms

RpS11

Location

Primary_assembly 2R: 12,199,024-12,200,815 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants) and 295 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0088007	RpS11-RC	738	155aa	FBpp0087115	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B2AJL4 L0CPD9 L0CPE3 L0CPK9 L0CPL5 L0CPM0 L0CQQ8 L0CQR2 L0CR44 L0CR49 L0CRF4 L0CRF8 Q0E9B6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0088006	RpS11-RB	569	154aa	FBpp0087114	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8U9 C4JD65	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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