hydra
hydra
Primary_assembly X: 20,670,832-20,677,063 reverse strand.
BDGP6.46:AE014298.5
This gene has 8 transcripts (splice variants).
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0077294 | hydra-RA | 1598 | 302aa | FBpp0076986 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0RNF6 Q8IQ35 Q8T8X3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0304575 | hydra-RF | 1476 | 302aa | FBpp0293117 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IQ35 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0304577 | hydra-RH | 1475 | 302aa | FBpp0293119 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VRB5 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0304576 | hydra-RG | 1474 | 302aa | FBpp0293118 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VRB5 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0304578 | hydra-RI | 1465 | 302aa | FBpp0293120 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VRB5 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0343572 | hydra-RJ | 1459 | 302aa | FBpp0310172 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IQ35 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0304574 | hydra-RD | 1458 | 302aa | FBpp0293116 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VRB5 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0077295 | hydra-RB | 1440 | 302aa | FBpp0076987 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A5YWF7 A5YWF9 A5YWG2 A5YWG5 A5YWG7 F3YDA7 Q9VRB5 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
