Summary
- Splice variants
- Transcript comparison
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Sequence
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Comparative Genomics
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Gene: Alms1a FBgn0025388

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Description

Alstrom syndrome 1a

Gene Synonyms

Alms1a

Location

Primary_assembly X: 4,631,052-4,636,004 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0300755	Alms1a-RD	4689	1322aa	FBpp0289979	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O77273 Q5BI31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0300754	Alms1a-RC	4368	1322aa	FBpp0289978	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BI31	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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