Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pdh FBgn0011693

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Description

Photoreceptor dehydrogenase

Gene Synonyms

Pdh

Location

Primary_assembly 3L: 16,353,233-16,354,297 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 317 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0075426	Pdh-RA	945	278aa	FBpp0075184	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VV42	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0075427	Pdh-RB	942	277aa	FBpp0075185	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQN8	-
FBtr0114536	Pdh-RC	920	261aa	FBpp0113028	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KNR7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0114537	Pdh-RD	913	260aa	FBpp0113029	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z061	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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