Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: bgcn FBgn0004581

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Description

benign gonial cell neoplasm

Gene Synonyms

bgcn

Location

Primary_assembly 2R: 23,853,270-23,858,921 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0072232	bgcn-RA	4159	1215aa	FBpp0072141	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1YJU8 A1YJV0 A1YJV5 A1YJV6 A1YJW9 A1YJX3 Q9W1I2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0344878	bgcn-RB	4144	1210aa	FBpp0311191	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGG1 A1YJU6 A1YJU7 A1YJW8 A1YJX6 Q8T4D2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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