Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sol FBgn0003464

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Description

small optic lobes

Gene Synonyms

sol

Location

Primary_assembly X: 21,350,280-21,357,912 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 234 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0089678	sol-RB	5592	1594aa	FBpp0088620	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YDJ2 F3YDK6 P27398	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0301583	sol-RE	5589	1593aa	FBpp0290798	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJ98	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0346608	sol-RF	5153	1515aa	FBpp0312188	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
FBtr0089679	sol-RA	4990	395aa	FBpp0088621	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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