gastrulation-defective
gd
Primary_assembly X: 11,985,154-11,987,764 reverse strand.
BDGP6.46:AE014298.5
This gene has 4 transcripts (splice variants) and 24 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0332309 | gd-RD | 1923 | 531aa | FBpp0304588 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6J600 F6J613 F6J621 F6J627 F6J634 O62589 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| FBtr0347416 | gd-RF | 2234 | 528aa | FBpp0312566 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0332310 | gd-RE | 1932 | 179aa | FBpp0304589 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6J5Y8 | - |
| FBtr0332308 | gd-RC | 1914 | 528aa | FBpp0304587 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6J5Z6 F6J5Z9 F6J606 F6J607 F6J629 F6J632 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
