Transcript: ENSDART00000130995.3 ftr53-202

Description

finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]

Location

About this transcript

This transcript has 3 exons, is associated with 23 variant alleles and maps to 187 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000141997.2	ftr53-203	967	301aa	ENSDARP00000113518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000060425.6	ftr53-201	2108	192aa	ENSDARP00000060424.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130995.3	ftr53-202	2114	192aa	ENSDARP00000108557.2	Nonsense mediated decay	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 2,114 bps, Translation length: 192 residues

Version

ENSDART00000130995.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.