Transcript: ENSDART00000138604.3 nfic-203

Description

nuclear factor I/C [Source:ZFIN;Acc:ZDB-GENE-080305-2]

Location

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 3946 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088668.7	nfic-201	1563	520aa	ENSDARP00000083101.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000138604.3	nfic-203	1725	499aa	ENSDARP00000118559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S4Z1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135850.2	nfic-202	435	145aa	ENSDARP00000114279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QF29	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,725 bps, Translation length: 499 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138604.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.