Transcript: ENSDART00000163860.2 raf1a-203

Description

Raf-1 proto-oncogene, serine/threonine kinase a [Source:ZFIN;Acc:ZDB-GENE-990415-41]

Location

Chromosome 23: 4,709,802-4,747,277 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 32 domains and features, is associated with 857 variant alleles and maps to 233 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000096415.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166503.2	raf1a-204	2455	654aa	ENSDARP00000130779.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000163860.2	raf1a-203	2362	643aa	ENSDARP00000137636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IN14	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000158752.2	raf1a-202	2258	291aa	ENSDARP00000132202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000144761.2	raf1a-201	739	127aa	ENSDARP00000115152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,362 bps, Translation length: 643 residues

Version

ENSDART00000163860.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000163860.2 raf1a-203

Summary

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Transcript: ENSDART00000163860.2 raf1a-203

Summary

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