Transcript: ENSDART00000185546.1 caprin1b-205

Description

cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]

Location

Chromosome 18: 38,246,940-38,270,077 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 18 domains and features, is associated with 492 variant alleles and maps to 308 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000054272.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000098889.5	caprin1b-201	2654	695aa	ENSDARP00000089659.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185546.1	caprin1b-205	3373	695aa	ENSDARP00000149522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139519.2	caprin1b-202	615	87aa	ENSDARP00000118113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143016.3	caprin1b-203	595	127aa	ENSDARP00000118518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145383.2	caprin1b-204	902	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,373 bps, Translation length: 695 residues

Version

ENSDART00000185546.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000185546.1 caprin1b-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000185546.1 caprin1b-205

Summary

About Us

Get help

Our sister sites

Follow us