Transcript: ENSDART00000143903.2 six4a-202

Description

SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]

Location

About this transcript

This transcript has 3 exons, is associated with 254 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135381.3	six4a-201	2358	593aa	ENSDARP00000126511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IG26	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143903.2	six4a-202	2046	262aa	ENSDARP00000126337.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 2,046 bps, Translation length: 262 residues

Version

ENSDART00000143903.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.