Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: abt1 ENSDARG00000043666

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Description

activator of basal transcription 1 [Source:ZFIN;Acc:ZDB-GENE-050522-127]

Gene Synonyms

im:7139827, zgc:109995

Location

Chromosome 8: 8,483,664-8,489,886 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064113.5	abt1-201	1415	305aa	ENSDARP00000064112.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503Z6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183334.1	abt1-203	1411	305aa	ENSDARP00000148206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503Z6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131849.2	abt1-202	771	159aa	ENSDARP00000120413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UYJ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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