Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL1A1 ENSCJAG00000003818

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Description

collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]

Location

Primary_assembly 5: 112,217,661-112,233,837 forward strand.

mCalJac1.pat.X:CM021919.1

About this gene

This gene has 4 transcripts (splice variants), 252 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000007736.5	COL1A1-201	4735	1464aa	ENSCJAP00000007319.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6S739	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000091502.2	COL1A1-202	4582	1413aa	ENSCJAP00000067894.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4VR10	-
ENSCJAT00000109628.2	COL1A1-203	4582	1413aa	ENSCJAP00000070664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4VYJ2	-
ENSCJAT00000102174.2	COL1A1-204	4375	1344aa	ENSCJAP00000079111.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WN77	-

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Summary

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