Transcript: Y61A9LA.1b.1

Description

MFS domain-containing protein [Source:NCBI gene;Acc:178849]

Location

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features and maps to 61 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y61A9LA.1a.1	-	2100	526aa	Y61A9LA.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N309	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Y61A9LA.1b.1	-	1970	512aa	Y61A9LA.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RBP0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,970 bps, Translation length: 512 residues

Version

Y61A9LA.1b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase