Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALN1 ENSBTAG00000043969

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Description

calneuron 1 [Source:VGNC Symbol;Acc:VGNC:26714]

Location

Primary_assembly 25: 28,636,197-29,091,973 forward strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 3 transcripts (splice variants), 277 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000118565.1	CALN1-203	1787	261aa	ENSBTAP00000098342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000117712.1	CALN1-201	1787	219aa	ENSBTAP00000101692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000061255.3	CALN1-202	1646	211aa	ENSBTAP00000053698.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BDZ7	-

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Summary

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