Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OPCML ENSBTAG00000020769

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Description

opioid binding protein/cell adhesion molecule like [Source:VGNC Symbol;Acc:VGNC:32435]

Location

Primary_assembly 29: 33,455,448-34,507,701 forward strand.

ARS-UCD1.3:CM008196.2

About this gene

This gene has 5 transcripts (splice variants), 225 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000130518.1	OPCML-203	1479	354aa	ENSBTAP00000079350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000036316.5	OPCML-205	1227	327aa	ENSBTAP00000036178.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1ME55	-
ENSBTAT00000083522.2	OPCML-202	1209	345aa	ENSBTAP00000069010.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MES2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000027678.7	OPCML-201	1017	338aa	ENSBTAP00000027678.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P11834	-
ENSBTAT00000084870.1	OPCML-204	978	325aa	ENSBTAP00000070432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MI99	-

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Summary

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