PDZ domain-containing protein [Source:NCBI gene;Acc:171776]
Chromosome I: 2,160,038-2,209,644 forward strand.
WBcel235:BX284601.5
This gene has 15 transcripts (splice variants) and 226 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| W03F11.6a.1 | - | 5310 | 1658aa | W03F11.6a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9BIC1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| W03F11.6c.1 | - | 5308 | 1660aa | W03F11.6c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86NJ4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| W03F11.6f.1 | - | 5025 | 1564aa | W03F11.6f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5LPT9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| W03F11.6d.1 | - | 5021 | 1562aa | W03F11.6d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86NJ3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| W03F11.6o.1 | - | 4862 | 1498aa | W03F11.6o.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2C9C357 | - |
| W03F11.6g.1 | - | 4149 | 1382aa | W03F11.6g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5LX70 | - |
| W03F11.6e.1 | afd-1-212 | 4078 | 1252aa | W03F11.6e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M1ZJY5 | - |
| W03F11.6i.1 | - | 3963 | 1320aa | W03F11.6i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5M8U5 | - |
| W03F11.6h.1 | - | 3861 | 1286aa | W03F11.6h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5M5P8 | - |
| W03F11.6k.1 | afd-1-211 | 3684 | 1227aa | W03F11.6k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5LPU4 | - |
| W03F11.6j.1 | - | 3675 | 1224aa | W03F11.6j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5LV54 | - |
| W03F11.6m.1 | afd-1-213 | 3438 | 1145aa | W03F11.6m.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5M5Q5 | - |
| W03F11.6l.1 | afd-1-210 | 3396 | 1131aa | W03F11.6l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5LX73 | - |
| W03F11.6n.1 | afd-1-214 | 3150 | 1049aa | W03F11.6n.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5M8V1 | - |
| W03F11.6b.1 | afd-1-215 | 2037 | 678aa | W03F11.6b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9BIC0 | - |
