CaDHerin family [Source:NCBI gene;Acc:177671]
Chromosome IV: 8,668,935-8,676,619 forward strand.
WBcel235:BX284604.4
This gene has 4 transcripts (splice variants).
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| F08B4.2a.1 | - | 4920 | 1449aa | F08B4.2a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q19194 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| F08B4.2c.1 | - | 4759 | 1442aa | F08B4.2c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5M5L3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F08B4.2d.1 | - | 4526 | 1299aa | F08B4.2d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5M8R9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F08B4.2b.1 | - | 4364 | 1306aa | F08B4.2b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZC7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
