Transcript: MGP_NODShiLtJ_T0053813.1

Description

lipocalin 2 [Source:MGI Symbol;Acc:MGI:96757]

Gene Synonyms

24p3, AW212229, NGAL, NRL, Sip24, neu-related lipocalin

Location

Chromosome 2: 32,633,991-32,637,443 reverse strand.

Reference strain equivalent

Lcn2

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features and maps to 207 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0025443.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0053813.1	-	1100	286aa	MGP_NODShiLtJ_P0053813	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15913	A0A0A6YW77 P11672	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0053817.1	-	908	271aa	MGP_NODShiLtJ_P0053817	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0053814.1	-	1374	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_NODShiLtJ_T0053815.1	-	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0053818.1	-	789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0053816.1	-	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,100 bps, Translation length: 286 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11672

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS15913

Version

MGP_NODShiLtJ_T0053813.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0053813.1

Summary

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Transcript: MGP_NODShiLtJ_T0053813.1

Summary

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