Mouse NOD/ShiLtJ (NOD_ShiLtJ_v1)
Description

ArfGAP with SH3 domain, ankyrin repeat and PH domain1 [Source:MGI Symbol;Acc:MGI:1342335]

Gene Synonyms

AV239055, DEF-1, Ddef1, Kiaa1249, PAP, Shag1, mKIAA1249, s19

Location
Reference strain equivalent
About this transcript

This transcript has 28 exons, is annotated with 66 domains and features and maps to 413 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_NODShiLtJ_T0040768.1-45821147aaMGP_NODShiLtJ_P0040768
 
Protein coding
-Ensembl Canonical
MGP_NODShiLtJ_T0040766.1-61641124aaMGP_NODShiLtJ_P0040766
 
Protein coding
CCDS56986, CCDS70631, CCDS70632, CCDS70633, CCDS70634E9QMI7 E9QMJ1 E9QN63
H3BJM7 H3BJY2 H3BK40
H3BKD4 H3BKE6 H3BL41
Q9QWY8
-
MGP_NODShiLtJ_T0040769.1-45801147aaMGP_NODShiLtJ_P0040769
 
Protein coding
--
MGP_NODShiLtJ_T0040770.1-45351132aaMGP_NODShiLtJ_P0040770
 
Protein coding
--
MGP_NODShiLtJ_T0040767.1-44151112aaMGP_NODShiLtJ_P0040767
 
Protein coding
--
MGP_NODShiLtJ_T0040772.1-44091090aaMGP_NODShiLtJ_P0040772
 
Protein coding
--
MGP_NODShiLtJ_T0040773.1-43141135aaMGP_NODShiLtJ_P0040773
 
Protein coding
--
MGP_NODShiLtJ_T0040771.1-42371087aaMGP_NODShiLtJ_P0040771
 
Protein coding
--
MGP_NODShiLtJ_T0040774.1-41491090aaMGP_NODShiLtJ_P0040774
 
Protein coding
--
MGP_NODShiLtJ_T0040775.1-34351144aaMGP_NODShiLtJ_P0040775
 
Protein coding
--
MGP_NODShiLtJ_T0040776.1-32281075aaMGP_NODShiLtJ_P0040776
 
Protein coding
--
MGP_NODShiLtJ_T0040780.1-631210aaMGP_NODShiLtJ_P0040780
 
Protein coding
--
MGP_NODShiLtJ_T0040784.1-46698aaMGP_NODShiLtJ_P0040784
 
Protein coding
--
MGP_NODShiLtJ_T0040781.1-396No protein-
 
Processed transcript
--
MGP_NODShiLtJ_T0040778.1-339No protein-
 
Processed transcript
--
MGP_NODShiLtJ_T0040783.1-238No protein-
 
Processed transcript
--
MGP_NODShiLtJ_T0040782.1-985No protein-
 
Retained intron
--
MGP_NODShiLtJ_T0040777.1-474No protein-
 
Retained intron
--
MGP_NODShiLtJ_T0040779.1-339No protein-
 
Retained intron
--
Statistics

Exons: 28, Coding exons: 28, Transcript length: 6,164 bps, Translation length: 1,124 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9QWY8

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS56986, CCDS70631, CCDS70632, CCDS70633, CCDS70634

Version

MGP_NODShiLtJ_T0040766.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.