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Transcript: MGP_LPJ_T0062917.1

Description

ligand dependent nuclear receptor interacting factor 1 [Source:MGI Symbol;Acc:MGI:2445214]

Gene Synonyms

2010012G17Rik, 4933421E11Rik, AI450568

Location

Chromosome 3: 109,532,243-109,603,297 forward strand.

Reference strain equivalent

Lrif1

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features and maps to 73 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0027662.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0062926.1-3103755aaMGP_LPJ_P0062926
 
Protein coding
-Ensembl Canonical
MGP_LPJ_T0062921.1-1669237aaMGP_LPJ_P0062921
 
Protein coding
--
MGP_LPJ_T0062917.1-929257aaMGP_LPJ_P0062917
 
Protein coding
CCDS17726, CCDS17727, CCDS38586D3YWW6 D3Z005 D3Z1H3
G3X9P5 G5E8M8 Q8CDD9
-
MGP_LPJ_T0062919.1-674178aaMGP_LPJ_P0062919
 
Protein coding
--
MGP_LPJ_T0062927.1-646129aaMGP_LPJ_P0062927
 
Protein coding
--
MGP_LPJ_T0062922.1-578124aaMGP_LPJ_P0062922
 
Protein coding
--
MGP_LPJ_T0062920.1-1989539aaMGP_LPJ_P0062920
 
Nonsense mediated decay
--
MGP_LPJ_T0062925.1-1411No protein-
 
Processed transcript
--
MGP_LPJ_T0062918.1-672No protein-
 
Processed transcript
--
MGP_LPJ_T0062924.1-4737No protein-
 
Retained intron
--
MGP_LPJ_T0062923.1-3138No protein-
 
Retained intron
--
MGP_LPJ_T0062928.1-720No protein-
 
Retained intron
--

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 929 bps, Translation length: 257 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CDD9

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS17726, CCDS17727, CCDS38586

Version

MGP_LPJ_T0062917.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.