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Transcript: MGP_LPJ_T0054911.1

Description

sodium channel, voltage-gated, type I, alpha [Source:MGI Symbol;Acc:MGI:98246]

Gene Synonyms

B230332M13, Nav1.1

Location

Chromosome 2: 65,947,886-65,997,580 reverse strand.

Reference strain equivalent

Scn1a

About this transcript

This transcript has 13 exons, is annotated with 3 domains and features and maps to 255 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0025715.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_LPJ_T0054912.1-83862009aaMGP_LPJ_P0054912
 
Protein coding
-Ensembl Canonical
MGP_LPJ_T0054913.1-82871998aaMGP_LPJ_P0054913
 
Protein coding
--
MGP_LPJ_T0054914.1-81161998aaMGP_LPJ_P0054914
 
Protein coding
--
MGP_LPJ_T0054915.1-59461981aaMGP_LPJ_P0054915
 
Protein coding
--
MGP_LPJ_T0054916.1-2659502aaMGP_LPJ_P0054916
 
Protein coding
--
MGP_LPJ_T0054917.1-1690500aaMGP_LPJ_P0054917
 
Protein coding
--
MGP_LPJ_T0054911.1-3562302aaMGP_LPJ_P0054911
 
Nonsense mediated decay
CCDS38131A0A0J9YUJ5 A0A0J9YVF2 A2APX6
A2APX7 A2APX8 A2APX9
-
MGP_LPJ_T0054918.1-2968No protein-
 
Retained intron
--

Summary

Statistics

Exons: 13, Coding exons: 7, Transcript length: 3,562 bps, Translation length: 302 residues

CCDS

This transcript is a member of the Mouse LP/J CCDS set: CCDS38131

Version

MGP_LPJ_T0054911.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.