Mouse FVB/NJ (FVB_NJ_v1)
Description

transcription factor 12 [Source:MGI Symbol;Acc:MGI:101877]

Gene Synonyms

A130037E08Rik, ALF1, Alf1, HEB, HEBAlt, HTF-4, HTF4, ME1, Meb, REB, bHLHb20

Location
Reference strain equivalent
About this transcript

This transcript has 21 exons, is annotated with 32 domains and features and maps to 447 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0092649.1-6293706aaMGP_FVBNJ_P0092649
 
Protein coding
CCDS23329, CCDS72271, CCDS72272Q3UXQ3 Q61286 V9GWS4
V9GWU2 V9GX18 V9GX29
V9GX46 V9GX66 V9GXC3
V9GXG5 V9GXM8 V9GXP0
V9GXQ6 V9GXR6
Ensembl Canonical
MGP_FVBNJ_T0092651.1-4621682aaMGP_FVBNJ_P0092651
 
Protein coding
--
MGP_FVBNJ_T0092652.1-4298536aaMGP_FVBNJ_P0092652
 
Protein coding
--
MGP_FVBNJ_T0092654.1-3986682aaMGP_FVBNJ_P0092654
 
Protein coding
--
MGP_FVBNJ_T0092655.1-3489706aaMGP_FVBNJ_P0092655
 
Protein coding
--
MGP_FVBNJ_T0092657.1-2257666aaMGP_FVBNJ_P0092657
 
Protein coding
--
MGP_FVBNJ_T0092658.1-1780523aaMGP_FVBNJ_P0092658
 
Protein coding
--
MGP_FVBNJ_T0092656.1-1522477aaMGP_FVBNJ_P0092656
 
Protein coding
--
MGP_FVBNJ_T0092666.1-964107aaMGP_FVBNJ_P0092666
 
Protein coding
--
MGP_FVBNJ_T0092660.1-838279aaMGP_FVBNJ_P0092660
 
Protein coding
--
MGP_FVBNJ_T0092664.1-600127aaMGP_FVBNJ_P0092664
 
Protein coding
--
MGP_FVBNJ_T0092653.1-416757aaMGP_FVBNJ_P0092653
 
Nonsense mediated decay
--
MGP_FVBNJ_T0092665.1-82679aaMGP_FVBNJ_P0092665
 
Nonsense mediated decay
--
MGP_FVBNJ_T0092667.1-81858aaMGP_FVBNJ_P0092667
 
Nonsense mediated decay
--
MGP_FVBNJ_T0092663.1-79756aaMGP_FVBNJ_P0092663
 
Nonsense mediated decay
--
MGP_FVBNJ_T0092661.1-69726aaMGP_FVBNJ_P0092661
 
Nonsense mediated decay
--
MGP_FVBNJ_T0092662.1-69121aaMGP_FVBNJ_P0092662
 
Nonsense mediated decay
--
MGP_FVBNJ_T0092659.1-932No protein-
 
Processed transcript
--
MGP_FVBNJ_T0092650.1-5743No protein-
 
Retained intron
--
MGP_FVBNJ_T0092669.1-4342No protein-
 
Retained intron
--
MGP_FVBNJ_T0092668.1-2192No protein-
 
Retained intron
--
Statistics

Exons: 21, Coding exons: 19, Transcript length: 6,293 bps, Translation length: 706 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61286

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS23329, CCDS72271, CCDS72272

Version

MGP_FVBNJ_T0092649.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.