Mouse FVB/NJ (FVB_NJ_v1)
Description

SRY (sex determining region Y)-box 6 [Source:MGI Symbol;Acc:MGI:98368]

Gene Synonyms

AI987981, SOX-LZ, Sox-6

Reference strain equivalent
About this transcript

This transcript has 16 exons, is annotated with 28 domains and features and maps to 450 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0085604.1-2903828aaMGP_FVBNJ_P0085604
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0085597.1-8668786aaMGP_FVBNJ_P0085597
 
Protein coding
CCDS40097, CCDS40098, CCDS52369A0A0U1RNH0 A0A0U1RNI3 A0A0U1RNW8
A0A0U1RPC1 E9PUW0 P40645
Q3V1J7 Q8BSS6
-
MGP_FVBNJ_T0085598.1-8227827aaMGP_FVBNJ_P0085598
 
Protein coding
--
MGP_FVBNJ_T0085599.1-8193785aaMGP_FVBNJ_P0085599
 
Protein coding
--
MGP_FVBNJ_T0085600.1-8079787aaMGP_FVBNJ_P0085600
 
Protein coding
--
MGP_FVBNJ_T0085601.1-5122787aaMGP_FVBNJ_P0085601
 
Protein coding
--
MGP_FVBNJ_T0085603.1-2863828aaMGP_FVBNJ_P0085603
 
Protein coding
--
MGP_FVBNJ_T0085602.1-2825827aaMGP_FVBNJ_P0085602
 
Protein coding
--
MGP_FVBNJ_T0085610.1-448125aaMGP_FVBNJ_P0085610
 
Protein coding
--
MGP_FVBNJ_T0085608.1-331110aaMGP_FVBNJ_P0085608
 
Protein coding
--
MGP_FVBNJ_T0085606.1-828No protein-
 
Processed transcript
--
MGP_FVBNJ_T0085611.1-479No protein-
 
Processed transcript
--
MGP_FVBNJ_T0085607.1-3855No protein-
 
Retained intron
--
MGP_FVBNJ_T0085605.1-2258No protein-
 
Retained intron
--
MGP_FVBNJ_T0085612.1-1980No protein-
 
Retained intron
--
MGP_FVBNJ_T0085609.1-553No protein-
 
Retained intron
--
Statistics

Exons: 16, Coding exons: 14, Transcript length: 8,668 bps, Translation length: 786 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P40645

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS40097, CCDS40098, CCDS52369

Version

MGP_FVBNJ_T0085597.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.