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Transcript: MGP_FVBNJ_T0059269.1

Description

RNA binding motif protein 38 [Source:MGI Symbol;Acc:MGI:1889294]

Gene Synonyms

Rnpc1, Seb4, Seb4l

Location

Chromosome 2: 169,443,652-169,455,663 forward strand.

Reference strain equivalent

Rbm38

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features and maps to 168 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0026751.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0059271.1-1639237aaMGP_FVBNJ_P0059271
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0059273.1-440125aaMGP_FVBNJ_P0059273
 
Protein coding
--
MGP_FVBNJ_T0059269.1-93678aaMGP_FVBNJ_P0059269
 
Nonsense mediated decay
CCDS17139G3UWQ8 G3UWX7 G3UXG4
G3UXN1 Q62176 		-
MGP_FVBNJ_T0059272.1-620107aaMGP_FVBNJ_P0059272
 
Nonsense mediated decay
--
MGP_FVBNJ_T0059270.1-2280No protein-
 
Retained intron
--
MGP_FVBNJ_T0059274.1-1527No protein-
 
Retained intron
--

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 936 bps, Translation length: 78 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62176

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS17139

Version

MGP_FVBNJ_T0059269.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.