Transcript: MGP_FVBNJ_T0053748.1

Description

protein-O-mannosyltransferase 1 [Source:MGI Symbol;Acc:MGI:2138994]

Gene Synonyms

AI505244

Location

Chromosome 2: 29,017,590-29,035,823 forward strand.

Reference strain equivalent

Pomt1

About this transcript

This transcript has 20 exons, is annotated with 29 domains and features and maps to 258 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0025406.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0053748.1	-	2912	744aa	MGP_FVBNJ_P0053748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15908	A0A0A6YXZ7 B0R070 B0R071 D6RI46 Q8R2R1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0053752.1	-	799	225aa	MGP_FVBNJ_P0053752	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0053753.1	-	744	231aa	MGP_FVBNJ_P0053753	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0053754.1	-	827	12aa	MGP_FVBNJ_P0053754	Nonsense mediated decay		-	-
MGP_FVBNJ_T0053757.1	-	703	64aa	MGP_FVBNJ_P0053757	Nonsense mediated decay		-	-
MGP_FVBNJ_T0053751.1	-	3334	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0053750.1	-	2171	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0053756.1	-	878	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0053758.1	-	870	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0053755.1	-	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0053749.1	-	440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,912 bps, Translation length: 744 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8R2R1

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS15908

Version

MGP_FVBNJ_T0053748.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0053748.1

Summary

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Transcript: MGP_FVBNJ_T0053748.1

Summary

About Us

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