Mouse CAST/EiJ (CAST_EiJ_v1)
Description

calcium channel, voltage-dependent, alpha 1I subunit [Source:MGI Symbol;Acc:MGI:2178051]

Gene Synonyms

Ca(V)3.3

Location
Reference strain equivalent
About this transcript

This transcript has 38 exons, is annotated with 80 domains and features and maps to 308 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0041564.1-96842199aaMGP_CASTEiJ_P0041564
 
Protein coding
CCDS49670E0CXK2 E9Q7P2 F6TAX9
F6V0N5 F7BCE6 F7BQ85
Ensembl Canonical
MGP_CASTEiJ_T0041570.1-779259aaMGP_CASTEiJ_P0041570
 
Protein coding
--
MGP_CASTEiJ_T0041567.1-394131aaMGP_CASTEiJ_P0041567
 
Protein coding
--
MGP_CASTEiJ_T0041569.1-313104aaMGP_CASTEiJ_P0041569
 
Protein coding
--
MGP_CASTEiJ_T0041565.1-68151835aaMGP_CASTEiJ_P0041565
 
Nonsense mediated decay
--
MGP_CASTEiJ_T0041568.1-27384aaMGP_CASTEiJ_P0041568
 
Nonsense mediated decay
--
MGP_CASTEiJ_T0041566.1-93772214aaMGP_CASTEiJ_P0041566
 
Unknown likely coding
--
Statistics

Exons: 38, Coding exons: 36, Transcript length: 9,684 bps, Translation length: 2,199 residues

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS49670

Version

MGP_CASTEiJ_T0041564.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.