Mouse CAST/EiJ (CAST_EiJ_v1)
Description

ArfGAP with SH3 domain, ankyrin repeat and PH domain1 [Source:MGI Symbol;Acc:MGI:1342335]

Gene Synonyms

AV239055, DEF-1, Ddef1, Kiaa1249, PAP, Shag1, mKIAA1249, s19

Location
Reference strain equivalent
About this transcript

This transcript has 28 exons, is annotated with 66 domains and features and maps to 367 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0040816.1-45811147aaMGP_CASTEiJ_P0040816
 
Protein coding
-Ensembl Canonical
MGP_CASTEiJ_T0040813.1-61681124aaMGP_CASTEiJ_P0040813
 
Protein coding
CCDS56986, CCDS70631, CCDS70632, CCDS70633, CCDS70634E9QMI7 E9QMJ1 E9QN63
H3BJM7 H3BJY2 H3BK40
H3BKD4 H3BKE6 H3BL41
Q9QWY8
-
MGP_CASTEiJ_T0040817.1-45791147aaMGP_CASTEiJ_P0040817
 
Protein coding
--
MGP_CASTEiJ_T0040820.1-45341132aaMGP_CASTEiJ_P0040820
 
Protein coding
--
MGP_CASTEiJ_T0040815.1-44141112aaMGP_CASTEiJ_P0040815
 
Protein coding
--
MGP_CASTEiJ_T0040818.1-44081090aaMGP_CASTEiJ_P0040818
 
Protein coding
--
MGP_CASTEiJ_T0040821.1-43131135aaMGP_CASTEiJ_P0040821
 
Protein coding
--
MGP_CASTEiJ_T0040819.1-42361087aaMGP_CASTEiJ_P0040819
 
Protein coding
--
MGP_CASTEiJ_T0040822.1-41481090aaMGP_CASTEiJ_P0040822
 
Protein coding
--
MGP_CASTEiJ_T0040824.1-34351144aaMGP_CASTEiJ_P0040824
 
Protein coding
--
MGP_CASTEiJ_T0040823.1-32281075aaMGP_CASTEiJ_P0040823
 
Protein coding
--
MGP_CASTEiJ_T0040828.1-631210aaMGP_CASTEiJ_P0040828
 
Protein coding
--
MGP_CASTEiJ_T0040832.1-47298aaMGP_CASTEiJ_P0040832
 
Protein coding
--
MGP_CASTEiJ_T0040829.1-396No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0040826.1-343No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0040831.1-238No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0040830.1-986No protein-
 
Retained intron
--
MGP_CASTEiJ_T0040825.1-474No protein-
 
Retained intron
--
MGP_CASTEiJ_T0040827.1-339No protein-
 
Retained intron
--
MGP_CASTEiJ_T0040814.1-1404422aaMGP_CASTEiJ_P0040814
 
Unknown likely coding
--
Statistics

Exons: 28, Coding exons: 28, Transcript length: 6,168 bps, Translation length: 1,124 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9QWY8

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS56986, CCDS70631, CCDS70632, CCDS70633, CCDS70634

Version

MGP_CASTEiJ_T0040813.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.