Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: MGP_CASTEiJ_T0056495.1

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Description

brain derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:88145]

Location

Chromosome 2: 111,130,755-111,184,804 forward strand.

Reference strain equivalent

About this transcript

This transcript has 2 exons, is annotated with 21 domains and features and maps to 200 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0025425.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0056505.1	-	3904	289aa	MGP_CASTEiJ_P0056505	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0056495.1	-	4265	257aa	MGP_CASTEiJ_P0056495	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38193, CCDS38194	A2AII2 H9H9S8 P21237 Q541P3	-
MGP_CASTEiJ_T0056497.1	-	4124	249aa	MGP_CASTEiJ_P0056497	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056498.1	-	4041	249aa	MGP_CASTEiJ_P0056498	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056502.1	-	3972	249aa	MGP_CASTEiJ_P0056502	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056500.1	-	3964	249aa	MGP_CASTEiJ_P0056500	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056504.1	-	3853	249aa	MGP_CASTEiJ_P0056504	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056503.1	-	3838	249aa	MGP_CASTEiJ_P0056503	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056496.1	-	3829	249aa	MGP_CASTEiJ_P0056496	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056499.1	-	3818	249aa	MGP_CASTEiJ_P0056499	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0056501.1	-	3706	249aa	MGP_CASTEiJ_P0056501	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-

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Protein summary

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Protein domains for MGP_CASTEiJ_P0056495.

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