Description
histone deacetylase 5 [Source:MGI Symbol;Acc:MGI:1333784]
Gene Synonyms
AI426555, Hdac4, mHDA1, mKIAA0600
Location
Chromosome 11: 105,004,153-105,041,182 reverse strand.
Reference strain equivalent
About this transcript
This transcript has 25 exons, is annotated with 36 domains and features and maps to 485 oligo probes.
Gene
This transcript is a product of gene MGP_CASTEiJ_G0018531.1 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_CASTEiJ_T0032228.1 | - | 4266 | 1120aa | MGP_CASTEiJ_P0032228 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, | |
| MGP_CASTEiJ_T0032227.1 | - | 4847 | 1029aa | MGP_CASTEiJ_P0032227 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS36341, CCDS70320, CCDS70321 | A2AWS5 B7ZDF3 B7ZDF4 B7ZDF5 B7ZDF6 B7ZDF7 D6RH93 Q3UJF1 | - |
| MGP_CASTEiJ_T0032236.1 | - | 3785 | 1114aa | MGP_CASTEiJ_P0032236 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0032235.1 | - | 3756 | 1101aa | MGP_CASTEiJ_P0032235 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0032243.1 | - | 721 | 158aa | MGP_CASTEiJ_P0032243 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0032242.1 | - | 692 | 175aa | MGP_CASTEiJ_P0032242 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0032233.1 | - | 427 | 142aa | MGP_CASTEiJ_P0032233 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_CASTEiJ_T0032234.1 | - | 3869 | 64aa | MGP_CASTEiJ_P0032234 | Nonsense mediated decay | - | - | |
| MGP_CASTEiJ_T0032246.1 | - | 493 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0032245.1 | - | 422 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_CASTEiJ_T0032232.1 | - | 5380 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032231.1 | - | 1008 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032237.1 | - | 851 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032238.1 | - | 813 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032229.1 | - | 754 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032239.1 | - | 695 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032241.1 | - | 672 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032244.1 | - | 650 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032240.1 | - | 645 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | |
| MGP_CASTEiJ_T0032230.1 | - | 537 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |